RNDr. Gabriel Žoldák, PhD.

 

Education:

01/2017-03/2017: Drug development crash-course, from screening to clinical phases and market access overview, BioM, Martinsried, GER
11/2015: Good Laboratory Practices, GLP, pre-clinical quality assurance system, Klinkner & Partner, Saarbrücken, GER
11/2015: Good Manufacturing Practices, GMP, quality assurance system for production of therapeutics, PromoCell Academy, Heidelberg, GER
05/2006: Ph.D. thesis defense
09/2003 – 05/2006: PJ Safarik University Kosice – Ph.D. study in Biochemistry
09/2001 – 06/2003: PJ Safarik University Kosice (Slovakia) – Msc. in Biochemistry
09/1998 – 07/2001: PJ Safarik University Kosice (Slovakia) – Bc. in Chemistry

 

Research interests: 

  1. Chaperone-assisted protein folding, stability and solubility
  2. Structure-Sequence-Function relationship of chaperones (g., Hsp70) and drug development
  3. Advanced biophysical methods and laser optical tweezers

 

Education:

01/2017-03/2017                   Drug development crash-course, from screening to clinical phases and market access overview, BioM, Martinsried, GER

11/2015                                  Good Laboratory Practices, GLP, pre-clinical quality assurance system, Klinkner & Partner, Saarbrücken, GER

11/2015                                  Good Manufacturing Practices, GMP, quality assurance system for production of therapeutics, PromoCell Academy, Heidelberg, GER

05/2006                                  Ph.D. thesis defense

09/2003 – 05/2006                PJ Safarik University Kosice – Ph.D. study in Biochemistry

09/2001 – 06/2003                PJ Safarik University Kosice (Slovakia) – Msc. in Biochemistry

09/1998 – 07/2001                PJ Safarik University Kosice (Slovakia) – Bc. in Chemistry

Languages:

german  (C1/C2 level, TestDaF certification), english (C1), slovak (mother tongue), czech (B1)

Positions:

11/2017-                                group leader CIB, TIP-UPJŠ

Postdoctoral research training:

08/2012-11/2017                 Technische Universität München, Team Leader

05/2010 – 08/2012               Technische Universität München, DFG Princ. Investigator

01/2010-04/2010                 Conceptual design of DFG Grant

06/2006-12/2009                  Universität Bayreuth in cooperation with ROCHE DIAGNOSTICS, Penzberg, GER – DAAD Fellow

  1. Chaperone-assisted protein folding, stability and solubility
  2. Advanced biophysical methods and laser optical tweezers

55  publications (33 CC-papers), Citations:  ˃650, H-index 15

ADC – publications in foreign current-content indexed journals

ADC1

Thermodynamic properties of nucleotide-free EF-Tu from Thermus thermophilus in the presence of low-molecular weight effectors of its GTPase activity / Erik Sedlák … [et al.]. In: Biochimica et Biophysica Acta. – ISSN 0167-4838. – Vol. 1597 (2002), p. 22-27. [SEDLÁK, Erik – ŽOLDÁK, Gabriel – ANTALÍK, Marián – SPRINZL, Mathias]

ADC2

Role of conformational flexibility for enzymatic activity in NADH oxidase from Thermus thermophilus / Gabriel Žoldák … [et al.]. In: European Journal of Biochemistry. – ISSN 0014-2956. – Vol. 270 (2003), s. 4887-4897. [ŽOLDÁK, Gabriel – ANTALÍK, Marián – SEDLÁK, Erik – SPRINZL, Mathias – ŠUŤÁK, Róbert]

ADC3

Irreversible Thermal Denaturation of Glucose Oxidase from Aspergillus niger Is the Transition to the Denatured State with Residual Structure / Gabriel Zoldák … [et al.]. In: Journal of Biological Chemistry. – ISSN 0021-9258. – Vol. 279, no. 46 (2004), s. 47601-47609. [ŽOLDÁK, Gabriel – MUSATOV, Andrej – SEDLÁK, Erik – STUPÁK, Marek – ZUBRIK, Anton]

ADC4

Modulation of activity of NADH oxidase from Thermus thermophilus through change in flexibility in the enzyme active site induced by Hofmeister series anions / Gabriel Žoldák, Mathias Sprinzl, Erik Sedlák. In: European Journal of Biochemistry. – ISSN 0014-2956. – Vol. 271 (2004), s. 48-57. [ŽOLDÁK, Gabriel – SEDLÁK, Erik – SPRINZL, Mathias]

ADC5

Cofactor Assisted Gating Mechanism in the Active Site of NADH Oxidase from Thermus thermophilus / Jozef Hritz… [et al.]. In: Proteins-Structure function and Genetics. – ISSN 0887-3585. – Roč. 64 (2006), s. 465-476. [HRITZ, Jozef – SEDLÁK, Erik – ŽOLDÁK, Gabriel]

ADC6

Irreversible thermal denaturation of elongation factor T s from Thermus thermophilus effectof the residual structure and intermonomer disulfide bond / Gabriel Žoldák… [et al.

In: Biochimica et Biophysica Acta – Proteins and Proteomics. – ISSN 1570-9639. – Roč. 1764, č. 1 (2006), s. 1277-1285. [ŽOLDÁK, Gabriel – ANTALÍK, Marián – MAREK, Jozef – SEDLÁK, Erik – SPRINZL, Mathias – VALUŠOVÁ, Eva – WOLFRUM, Alexandra]

ADC7

Unusual effect of salts on the homodimeric structure of NADH oxidase from Thermus thermophilus in acidic pH / Marek Stupák …[et al.]. In: Biochimica et Biophysica Acta – Bioenergetics. – ISSN 0005-2728. – Roč. 1764 (2006), s. 129-137. [STUPÁK, Marek – MUSATOV, Andrej – SEDLÁK, Erik – SPRINZL, Mathias – ŽOLDÁK, Gabriel]

ADC8

Conformational stability and dynamics of cytochrome c affect its alkaline isomerization / Nataša Tomášková… [et al.]. In: Journal of Biological Inorganic Chemistry. – ISSN 0949-8257. – Vol. 12, no. 2 (2007), s. 257-266. [TOMÁŠKOVÁ, Nataša – VARHAČ, Rastislav – ŽOLDÁK, Gabriel – OLEKŠÁKOVÁ, Lenka – SEDLÁKOVÁ, Dagmar – SEDLÁK, Erik]

ADC9

Release factors 2 froms Escherichia coli and Thermus thermophilus: structural and microcalorimetric studies / Gabriel Žoldák…[et al.]. In: Nucleic Acids Research. – ISSN 0305-1048. – Roč. 35, č. 4 (2007), s. 1343-1353. [ŽOLDÁK, Gabriel – DOBBEK, Holger – KONAREV, Peter V. – REDECKE, Lars – SEDLÁK, Erik – SPRINZL, Mathias – SVERGUN, Dimitri I. – VOERTLER, Stefan]

ADC10

Flexibility and enzyme activity of NADH oxidase from Thermus thermophilus in the presence of monovalent cations of Hofmeister series / Kamil Tóth … [et al.]. In: Biochimica et Biophysica Acta – Proteins and Proteomics. – ISSN 1570-9639. – Vol. 1784 (2008), iss. 5, s. 789-795. [TÓTH, Kamil – SEDLÁK, Erik – SPRINZL, Mathias – ŽOLDÁK, Gabriel]

ADC11

Multidomain initiation factor 2 from Thermus thermophilus consists of the individual autonomous domains / Gabriel Žoldák … [et al.]. In: Biochemistry. – ISSN 0006-2960. – Roč. 47 (2008), s. 4992-5005. [ŽOLDÁK, Gabriel – SEDLÁK, Erik – WOLFRUM, Alexandra – MUSATOV, Andrej – FEDUNOVÁ, Diana – SPRINZL, Mathias]

ADC12

Role of copper in thermal stability of human ceruloplasmin / Erik Sedlák, Gabriel Žoldák, Pernilla Wittung-Stafshede. In: Biophysical Journal. – ISSN 0006-3495. – vol. 94, iss.4 (2008), s. 1384-1391. [SEDLÁK, Erik – ŽOLDÁK, Gabriel – WITTUNG-STAFSHEDE, Pernilla]

ADC13

A Library of Fluorescent Peptides for Exploring the Substrate Specificities of Prolyl Isomerases / Gabriel Žoldák … [et al.]. In: Biochemistry. – ISSN 0006-2960. – Vol. 48, no. 43 (2009), s. 10423-10436. [ŽOLDÁK, Gabriel (aut%) – AUMUELLER, Tobias (20%) – LUECKE, Christian (10%) – HRITZ, Jozef (10%) – OSTENBRINK, Chris (10%) – FISCHER, Gunter (5%) – SCHMID, Franz X. (15%) ]

ADC14

Consequences of Domain Insertion on the Stability and Folding Mechanism of a Protein / Gabriel Žoldák … [et al.]. In: Journal of Molecular Biology. – ISSN 0022-2836. – Vol. 386, no. 4 (2009), s. 1138-1152. [ŽOLDÁK, Gabriel (50%) – CARSTENSEN, Linn (20%) – SCHOLZ, Christian (10%) – SCHMID, Franz X. (20%) ]

ADC15

Chaperone domains convert prolyl isomerases into generic catalysts of protein folding / Roman P. Jakob … [et al.]. In: Proceedings of the National Academy of Sciences of the United States of America. – ISSN 0027-8424. – Vol. 106, iss. 48 (2009), p. 20282-20287. [JAKOB, Roman P. (30%) – ŽOLDÁK, Gabriel (30%) – AUMUELLER, Tobias (10%) – SCHMID, Franz X. (30%) ]

ADC16

NMR Solution Structure of SlyD from Escherichia coli: Spatial Separation of Prolyl Isomerase and Chaperone Function / Ulrich Weininger … [et al.]. In: Journal of Molecular Biology. – ISSN 0022-2836. – Vol. 387, no. 2 (2009), s. 295-305. [WEININGER, Ulrich – HAUPT, Caroline – SCHWEIMER, Kristian – GRAUBNER, Wenke – KOVERMANN, Michael – BRUESER, Thomas – SCHOLZ, Christian – SCHAARSCHMIDT, Peter – ŽOLDÁK, Gabriel – SCHMID, Franz X. – BALBACH, Jochen]

ADC17

Activity of NADH oxidase from Thermus thermophilus in water/alcohol binary mixtures is limited by the stability of quaternary structure / Kamil Tóth … [et al.]. – Č. projektu: VEGA 1/3252/06, VEGA 1/4319/07. In: Journal of Molecular Catalysis B-Enzymatic. – ISSN 1381-1177. – Vol. 64, no. 1-2 (2010), s. 60-67. [TÓTH, Kamil (40%) – SEDLÁK, Erik (40%) – MUSATOV, Andrej (10%) – ŽOLDÁK, Gabriel (10%) ]

ADC18

Cooperation of the Prolyl Isomerase and Chaperone Activities of the Protein Folding Catalyst SlyD / Gabriel Žoldák, Franz Schmid. In: Journal of Molecular Biology. – ISSN 0022-2836. – Vol. 406, no 1 (2011), s. 176-194. [ŽOLDÁK, Gabriel (80%) – SCHMID, Franz X. (20%) ]

ADC19

Folding Mechanism of an Extremely Thermostable (beta alpha)(8)-Barrel Enzyme: A High Kinetic Barrier Protects the Protein from Denaturation / Linn Carstensen … [et al.].

In: Biochemistry. – ISSN 0006-2960. – Vol. 51, no. 16 (2012), s. 3420-3432. [CARSTENSEN, Linn (50%) – ŽOLDÁK, Gabriel (15%) – SCHMID, Franz X. (10%) – STERNER, Reinhard (25%) ]

ADC20

Force as a single molecule probe of multidimensional protein energy landscapes / Gabriel Žoldák, Matthias Rief. In: Current Opinion in Structural Biology. – ISSN 0959-440X. – Vol. 23, no. 1 (2013), s. 48-57. [ŽOLDÁK, Gabriel (70%) – RIEF, Matthias (30%) ]

ADC21

The Prolyl Isomerase SlyD Is a Highly Efficient Enzyme but Decelerates the Conformational Folding of a Client Protein / Gabriel Žoldák, Anne-Juliane Geitner, Franz X. Schmid.

In: Journal of the American Chemical Society. – ISSN 0002-7863. – Vol. 135, no. 11 (2013), s. 4372-4379. [ŽOLDÁK, Gabriel (50%) – GEITNER, Anne-Juliane (25%) – SCHMID, Franz X. (25%) ]

ADC22

Ultrafast folding kinetics and cooperativity of villin headpiece in single-molecule force spectroscopy / Gabriel Žoldák … [et al.]. In: Proceedings of the National Academy of Sciences of the United States of America. – ISSN 0027-8424. – Vol. 110, no. 45 (2013), s. 18156-18161. [ŽOLDÁK, Gabriel (50%) – STIGLER, Johannes (30%) – PELZ, Benjamin (5%) – LI, Hongbin (5%) – RIEF, Matthias (10%) ]

ADC23

Unique Proline-Rich Domain Regulates the Chaperone Function of AIPL1 / Jing Li … [et al.]. In: Biochemistry. – ISSN 0006-2960. – Vol. 52, no. 12 (2013), s. 2089-2096. [LI, Jing (40%) – ŽOLDÁK, Gabriel (10%) – KRIEHUBER, Thomas (5%) – SOROKA, Joanna (5%) – SCHMID, Franz X. (5%) – RICHTER, Klaus (20%) – BUCHNER, Johannes (15%) ]

ADC24

Force-dependent isomerization kinetics of a highly conserved proline switch modulates the mechanosensing region of filamin / Lorenz Rognoni … [et al.]. In: Proceedings of the National Academy of Sciences of the United States of America. – ISSN 0027-8424. – Vol. 111, no. 15 (2014), s. 5568-5573. [ROGNONI, Lorenz (30%) – MOEST, Tobias (20%) – ŽOLDÁK, Gabriel (20%) – RIEF, Matthias (30%) ]

ADC25

A Compact Native 24-Residue Supersecondary Structure Derived from the Villin Headpiece Subdomain / Henry G. Hocking … [et al.]. In: Biophysical Journal. – ISSN 0006-3495. – Vol. 108, no. 3 (2015), s. 678-686. [HOCKING, Henry G. (20%) – HAESE, Florian (20%) – MADL, Tobias (5%) – ZACHARIAS, Martin (5%) – RIEF, Matthias (5%) – ŽOLDÁK, Gabriel (45%) ]

ADC26

Nucleotides regulate the mechanical hierarchy between subdomains of the nucleotide binding domain of the Hsp70 chaperone DnaK / Daniela Bauer … [et al.]. In: Proceedings of the National Academy of Sciences of the United States of America. – ISSN 0027-8424. – Vol. 112, no. 33 (2015), p. 10389-10394. [BAUER, Daniela (20%) – MERZ, Dale R. (5%) – PELZ, Benjamin (5%) – THEISEN, Kelly E (5%) – YACYSHYN, Gail (5%) – MOKRANJAC, Dejana (5%) – DIMA, Ruxandra I. (5%) – RIEF, Matthias (20%) – ŽOLDÁK, Gabriel (20%) ]

ADC27

Subnanometre enzyme mechanics probed by single-molecule force spectroscopy / Benjamin Pelz … [et al.]. In: Nature Communications. – ISSN 2041-1723. – Vol. 7 (2016), s. 10848-10848. [PELZ, Benjamin (40%) – ŽOLDÁK, Gabriel (20%) – ZELLER, Fabian (10%) – ZACHARIAS, Martin (10%) – RIEF, Matthias (20%) ]

ADC28

Analysis of IgG kinetic stability by differential scanning calorimetry, probe fluorescence and light scattering / Michal Nemergut … [et al.]. – Č. projektu: VVGS 2016-72642,, VEGA 1/0423/16, APVV 15-0069. In: Protein Science. – ISSN 0961-8368. – Vol. 26, no. 11 (2017), s. 2229-2239. [NEMERGUT, Michal (15%) – ŽOLDÁK, Gabriel (10%) – SCHAEFER, Jonas V. (5%) – KAST, Florian (5%) – MIŠKOVSKÝ, Pavol (5%) – PLÜCKTHUN, Andreas (10%) – SEDLÁK, Erik (50%) ]

ADC29

Nanomechanics of the substrate binding domain of Hsp70 determine its allosteric ATP-induced conformational change / Soumit Sankar Mandal … [et al.]. In: Proceedings of the National Academy of Sciences of United States of America. – ISSN 0027-8424. – Vol. 114, no. 23 (2017), s. 6040-6045. [MANDAL, Soumit Sankar (20%) – MERZ, Dale R. (20%) – BUCHSTEINER, Maximilian (5%) – DIMA, Ruxandra I. (5%) – RIEF, Matthias (5%) – ŽOLDÁK, Gabriel (45%) ]

ADC30

The fluorescence intensities ratio is not a reliable parameter for evaluation of protein unfolding transitions / Gabriel Žoldák, Daniel Jancura, Erik Sedlák. – Č. projektu: VEGA 1/0423/16, APVV 15-0069. In: Protein Science. – ISSN 0961-8368. – Vol. 26, no. 6 (2017), s. 1236-1239. [ŽOLDÁK, Gabriel (20%) – JANCURA, Daniel (20%) – SEDLÁK, Erik (60%) ]

ADC31

The molten-globule residual structure is critical for reflavination of glucose oxidase / Katarína Garajová … [et al.]. – Č. projektu: VEGA 1/0423/16, APVV 15-0069. In: Biophysical Chemistry. – ISSN 0301-4622. – Vol. 230 (2017), s. 74-83. [GARAJOVÁ, Katarína (35%) – ZIMMERMANN, Martina (5%) – PETRENČÁKOVÁ, Martina (10%) – DZUROVÁ, Lenka (5%) – NEMERGUT, Michal (10%) – ŠKULTÉTY, Ľudovít (5%) – ŽOLDÁK, Gabriel (10%) – SEDLÁK, Erik (20%) ]

ADC32

A folding nucleus and minimal ATP binding domain of Hsp70 identified by single-molecule force spectroscopy / Daniela Bauer … [et al.]. – Č. projektu: CVTI reintregračný grant MŠVVaŠ SR – 7/CVTI/2018, A05:Mechanical control of enzyme conformations SFB 1035/A5, Communication between the domains of the DnaK chaperone characterized by single molecule force spectroscopy DFG ZO 291/1-1. In: Proceedings of the National Academy of Sciences of the United States of America. – ISSN 0027-8424. – Vol. 115, no. 18 (2018), s. 4666-4671. [BAUER, Daniela (20%) – MEINHOLD, Sarah (15%) – JAKOB, Roman P. (10%) – STIGLER, Johannes (5%) – MERKEL, Ulrich (10%) – MAIER, Timm (10%) – RIEF, Matthias (10%) – ŽOLDÁK, Gabriel (20%) ]

ADC33

Synergistic Effects of Copper Sites on Apparent Stability of Multicopper Oxidase, Fet3p / Erik Sedlák, Gabriel Žoldák, Pernilla Wittung-Stafshede. In: International Journal of Molecular Sciences. – ISSN 1422-0067. – Vol. 19, no. 1 (2018), s. 1-11. [SEDLÁK, Erik (60%) – ŽOLDÁK, Gabriel (30%) – WITTUNG-STAFSHEDE, Pernilla (10%) ]

ADD – Publications in slovak current-content indexed journals ( 1 )

ADD1

pH-Induced Changes in Activity and Conformation of NADH Oxidase from Thermus thermophilus / G. Žoldák … [et al.]. In: General Physiology and Biophysic. – ISSN 0231-5882. – Vol. 24 (2005), s. 279-298. [ŽOLDÁK, Gabriel – MUSATOV, Andrej – SEDLÁK, Erik – SPRINZL, Mathias – STUPÁK, Marek]

ADM – Vedecké práce v zahraničných časopisoch registrovaných v databázach Web of Science alebo SCOPUS ( 1 )

ADM1

Kraftspektroskopie – Dynamik und Manipulation einzelner Moleküle: Einzelmolekülanalyse / Gabriel Žoldák, Matthias Rief. In: BioSpektrum. – ISSN 0947-0867. – Vol. 20, no. 1 (2014), s. 33-35. [ŽOLDÁK, Gabriel (70%) – RIEF, Matthias (30%) ]

AED – scientiffic works in slovak reviewed scientiffic proceedings in slovak reviewed scientific monographies ( 7 )

AED1

Association of the chaperone SlyD with a permanently unfolded protein substrate / Gabriel Žoldák, Franz X. Schmid. In: Structure and Stability of Biomacromolecules SSB 2007 : 5th conference and satellite conference Modern Trends in Biomacromolecular Research : book of contributions : september 5-8, 2007, Košice, Slovak Republic. – Košice : Univerzita P.J. Šafárika v Košiciach, 2007. – S. 43-44. [ŽOLDÁK, Gabriel – SCHMID, Franz X.]

AED2

Calorimetric analysis of the kinetic stability of human ceruloplasmin / Erik Sedlák, Gabriel Žoldák, Pernilla Wittung-Stafshede. In: Structure and Stability of Biomacromolecules SSB 2007 : 5th conference and satellite conference Modern Trends in Biomacromolecular Research : book of contributions : september 5-8, 2007, Košice, Slovak Republic. – Košice : Univerzita P.J. Šafárika v Košiciach, 2007. – S. 86-87. [SEDLÁK, Erik – WITTUNG-STAFSHEDE, Pernilla – ŽOLDÁK, Gabriel]

AED3

Monovalent cations affect NADH oxidase from Thermus thermophilus: nonspecific electrostatic interactions rather than Hofmeister series / Kamil Tóth… [et al.]. In: Structure and Stability of Biomacromolecules SSB 2007 : 5th conference and satellite conference Modern Trends in Biomacromolecular Research : book of contributions : september 5-8, 2007, Košice, Slovak Republic. – Košice : Univerzita P.J. Šafárika v Košiciach, 2007. – S. 90-91. [TÓTH, Kamil – SEDLÁK, Erik – SPRINZL, Mathias – ŽOLDÁK, Gabriel]

AED4

On the substrate binding of NADH oxidase from Thermus thermophilus / Petra Vasiľková… [et al.]. In: Structure and Stability of Biomacromolecules SSB 2007 : 5th conference and satellite conference Modern Trends in Biomacromolecular Research : book of contributions : september 5-8, 2007, Košice, Slovak Republic. – Košice : Univerzita P.J. Šafárika v Košiciach, 2007. – S. 88-89. [VASIĽKOVÁ, Petra – HRITZ, Jozef – SEDLÁK, Erik – SPRINZL, Mathias – TÓTH, Kamil – ŽOLDÁK, Gabriel]

AED5

Optimized deflavination methods for glucose oxidase from Aspergillus niger / Lenka Bryndzová, Gabriel Žoldák, Erik Sedlák. In: Structure and Stability of Biomacromolecules SSB 2007 : 5th conference and satellite conference Modern Trends in Biomacromolecular Research : book of contributions : september 5-8, 2007, Košice, Slovak Republic. – Košice : Univerzita P.J. Šafárika v Košiciach, 2007. – S. 92-93. [DZUROVÁ, Lenka – SEDLÁK, Erik – ŽOLDÁK, Gabriel]

AED6

RateCon: software for kinetic analysis of the irreversible denaturation / Jozef Marek… [et al.]. In: Structure and Stability of Biomacromolecules SSB 2007 : 5th conference and satellite conference Modern Trends in Biomacromolecular Research : book of contributions : september 5-8, 2007, Košice, Slovak Republic. – Košice : Univerzita P.J. Šafárika v Košiciach, 2007. – S. 71-72. [MAREK, Jozef – DEMJÉN, Erna – SEDLÁK, Erik – ŽOLDÁK, Gabriel]

AED7

Termination of protein biosynthesis: Structure and stability of release factors in relation to their biochemical function / C.S.Vörtler… [et al.]. In: Structure and Stability of Biomacromolecules SSB 2007 : 5th conference and satellite conference Modern Trends in Biomacromolecular Research : book of contributions : september 5-8, 2007, Košice, Slovak Republic. – Košice : Univerzita P.J. Šafárika v Košiciach, 2007. – S. 28. [VÖRTLER, C.S. – SPRINZL, Mathias – ŽOLDÁK, Gabriel]

AFD –contributions in Slovak conferences ( 2 )

AFD1

Activity of NADH oxidase from Thermus thermophilus in water/alcohol binary mixtures is limited by the stability of quaternary structure / K. Tóth … [et al.]. – Č. projektu: VEGA 1/3252/06, VEGA 1/4319/07. In: Structure and Stability of Biomacromolecules SSB 2009 : 6th international conference : book of contributions : september 9-11, 2009, Košice, Slovakia. – Košice, 2009. – ISBN 9788096806065. – S. 100-101. [TÓTH, Kamil (25%) – SEDLÁK, Erik (25%) – MUSATOV, Andrej (25%) – ŽOLDÁK, Gabriel (25%) ]

AFD2

Reliable estimation of the kinetic parameters from irreversible DSC transitions / J. Marek … [et al.]. – Č. projektu: APVV 0682-07, VEGA 2-7055-27, VEGA 1-4319-0. In: Structure and Stability of Biomacromolecules SSB 2009 : 6th International Conference : book of contributions : 9.-11.september 2009, Košice. – Košice, 2009. – ISBN 9788096806065. – S. 123-124. [MAREK, Jozef (25%) – ŽOLDÁK, Gabriel (25%) – DEMJÉN, Erna (25%) – SEDLÁK, Erik (25%) ]

AFF – ABSTRACTS INVITED SLOVAK Conferences ( 2 )

AFF1

Mechanics of nanometer-sized protein machines / Gabriel Žoldák, Matthias Rief. – Č. projektu: A05:Mechanical control of enzyme conformations SFB 1035/A5, Communication between the domains of the DnaK chaperone characterized by single molecule force spectroscopy DFG ZO 291/1-1. In: Structure and Stability of Biomacromolecules : SSB 2017: 10th international conference : book of contributions : September 4 – 7, 2017, Košice. – Košice : Institut of Experimental Physics, Slovak Academy of Sciences, 2017. – ISBN 9788089656196. – S. 26-27. [ŽOLDÁK, Gabriel (80%) – RIEF, Matthias (20%) ]

AFF2

The study of protein nanomechanics employing optical force meter [elektronický zdroj] / Gabriel Žoldák ; recenzenti Katarína Reiffová, Zuzana Vargová et al.. In: New trends in chemistry : Trends in chemistry, research and education at Faculty of Science of P.J. Šafárik University in Košice : book of abstracts. – Košice : Univerzita Pavla Jozefa Šafárika v Košiciach, 2018. – ISBN 9788081526664. – S. 9-9. – Spôsob prístupu: https://unibook.upjs.sk/img/cms/2018/pf/new-trends-in-chemistry-2018-web.pdf. [ŽOLDÁK, Gabriel (100%) ]

AFG – Abstrakty príspevkov zo zahraničných vedeckých konferencií ( 1 )

AFG1

Analysis of kinetic stability model of IgG / M. Nemergut … [et al.]. – recenzované. – Č. projektu: VEGA 1/0423/16, VEGA 2/0009/16, APVV 15-0069. In: European Biophysics Journal with Biophysics Letters. – ISSN 0175-7571. – Vol. 46, suppl. 1 (2017), s. S350. [NEMERGUT, Michal (30%) – ŽOLDÁK, Gabriel (10%) – KAST, Florian (10%) – SCHAEFER, Jonas V. (10%) – PLÜCKTHUN, Andreas (10%) – SEDLÁK, Erik (30%) ]

AFH – ABSTRACTS SLOVAK CONFERENCES ( 3 )

AFH1

Conformational flexibility and activity of NADH oxidase from Thermus thermophilus / Gabriel Žoldák, Erik Sedlák, Mathias Sprinzl. In: Structure and Stability of Biomacromolecules SSB 2005 : 4th conference : Košice, Slovak Republic September 12 – 14, 2005 : book of contributions. – Košice, 2005. – S. 33-34. [ŽOLDÁK, Gabriel – SEDLÁK, Erik – SPRINZL, Mathias]

AFH2

Analysis of kinetic stability model of IgG / M. Nemergut … [et al.]. – Č. projektu: APVV 15-0069, VEGA 1/0423/16, VVGS 2016-72626. In: 10th International Conference: Structure and Stability of Biomacromolecules SSB 2017 : 4. – 7. september 2017, Košice. – Košice : Slovak Academy of Sciences, 2017. – ISBN 9788089656196. – S. 51. [NEMERGUT, Michal (45%) – ŽOLDÁK, Gabriel (2%) – SCHAEFER, Jonas V. (2%) – KAST, Florian (2%) – MIŠKOVSKÝ, Pavol (2%) – PLÜCKTHUN, Andreas (2%) – SEDLÁK, Erik (45%) ]

AFH3

Single-molecule nanomechanics of protein machines / Gabriel Žoldák. – Č. projektu: CVTI reintregračný grant 7/CVTI/2018, A05:Mechanical control of enzyme conformations SFB 1035/A5, Communication between the domains of the DnaK chaperone characterized by single molecule force spectroscopy DFG ZO 291/1-1. In: Book of Contributions : 8th Slovak Biophysical Symposium : 30.5.-1.6.2018, Košice. – Košice : Slovak Biophysical Society, 2018. – ISBN 9788097308674. – S. 20-21. [ŽOLDÁK, Gabriel (100%) ]

AFL – PosterS Slovak Conferences ( 4 )

AFL1

Cofactor assisted gating mechanism in the active site of NADH oxidase from Thermus thermophilus / Jozef Hritz, Gabriel Žoldák, Erik Sedlák. In: Structure and Stability of Biomacromolecules SSB 2005 : 4th conference : Košice, Slovak Republic September 12 – 14, 2005 : book of contributions. – Košice, 2005. – S. 83-84. [HRITZ, Jozef – SEDLÁK, Erik – ŽOLDÁK, Gabriel]

AFL2

Modulation of conformational dynamics of cytochrome c affects its alkaline isomerization / N. Tomášková … [et al.]. In: Structure and Stability of Biomacromolecules SSB 2005 : 4th conference : Košice, Slovak Republic September 12 – 14, 2005 : book of contributions. – Košice, 2005. – S. 87-88. [TOMÁŠKOVÁ, Nataša – VARHAČ, Rastislav – ŽOLDÁK, Gabriel – OLEKŠÁKOVÁ, Lenka – SEDLÁKOVÁ, Dagmar – SEDLÁK, Erik]

AFL3

Unusual effect of salts on homodimeric structure of NADH oxidase from Thermus thermophilus at acidic pH / M. Stupák … [et al.]. In: Structure and Stability of Biomacromolecules SSB 2005 : 4th conference : Košice, Slovak Republic September 12 – 14, 2005 : book of contributions. – Košice, 2005. – S. 85-86. [STUPÁK, Marek – MUSATOV, Andrej – SEDLÁK, Erik – SPRINZL, Mathias – ŽOLDÁK, Gabriel]

AFL4

Role of polypeptide chain dynamics for conformational isomerization and ligand binding. Cytochrome c study / N. Tomášková … [et al.]. – Č. projektu: VEGA 1272. In: Slovak Biophysical Symposium : book of contributions : Herľany, March 26-29, 2006. – Košice : Univerzita Pavla Jozefa Šafárika v Košiciach, 2006. – S. 60-61. [TOMÁŠKOVÁ, Nataša (20%) – VARHAČ, Rastislav (20%) – VARINSKÁ, Lenka (15%) – ŽOLDÁK, Gabriel (15%) – SEDLÁKOVÁ, Dagmar (15%) – SEDLÁK, Erik (15%) ]

2012 – 2016    Editorial Board of Chemical Papers

2006 –              ad hoc reviewer for journals: Proc. Natl. Acad Sci. USA, Biophysical Chemistry, Biophysical Journal, Chemical Papers, Cellular and Molecular Life Sciences

2018-                national reviewer for DAAD grants