Publications

2021 (27 publications)

  1. Siposova K., Kozar T.*, Stupakova M., Musatova A.: Complementary experimental and computational analysis of the effects of non-ionic detergents and phospholipids on insulin amyloid aggregation. Colloids and Surfaces B: Biointerfaces, 197:111428 (2021) Q1 IF4.389
  2. Poropat S.F., Kundrat M., Mannion P.D., Upchurch P., Tischler T.R., Elliott D.A: Second specimen of the Late Cretaceous Australian sauropod dinosaur Diamantinasaurus matildae provides new anatomical information on the skull and neck of early titanosaurs. Zoological Journal of the Linnean Society, zlaa173 (2021) Q1 IF2.824
  3. Huntosova V.*, Horvath D., Seliga R., Wagnieres G.: Influence of Oxidative Stress on Time-Resolved Oxygen Detection by [Ru(Phen)3]2+ In Vivo and In Vitro. Molecules, 26:485 (2021) Q2 IF3.267
  4. Mikulova L., Pechova I., Jancura D., Stupak M., Fabian M.*: Thermodynamics of the P-type Ferryl Form of Bovine Cytochrome c Oxidase. Biochemistry (Moscow), 86:74-83 (2021) Q2 IF1.978
  5. Sedlak E., Kozar T., Varhac R., Musatov A., Tomaskova N.: Anion-Specific Effects on the Alkaline State of Cytochrome c. Biochemistry (Moscow), 86:59-73 (2021) Q2 IF1.978
  6. Rendosova M., Gyepes R., Cigelova Maruscakova I., Mudronova D., Sabolova D., Kello M., Vilkova M., Almasi M., Huntosova V., Zemek O., Vargova Z.: An in vitro selective inhibitory effect of silver(i) aminoacidates against bacteria and intestinal cell lines and elucidation of the mechanism of action by means of DNA binding properties, DNA cleavage and cell cycle arrest. Dalton Transactions, 50:936-953 (2021) Q1 IF4.174
  7. Tomášková N., Novák P., Kožár T., Petrenčáková M., Jancura D., Yassaghi G., Man P., Sedlák E.*: Early modification of cytochrome c by hydrogen peroxide triggers its fast degradation. International Journal of Biological Macromolecules, 174:413-423 (2021) Q1 IF 5.162
  8. Zeleňáková A., Szűcsová J., Nagy Ľ, Girman V., Zeleňák V., Huntošová V.: Magnetic characterization and moderate cytotoxicity of magnetic mesoporous silica nanocomposite for drug delivery of naproxen. Nanomaterials, 11:901 (2021) Q2 IF4.324
  9. Zoričák M., Horváth D., Gazda V., Hudec O.: Spatial evolution of industries modelled by cellular automata. Journal of Business Research, 129:580-588 (2021) Q1 IF4.874
  10. Garcia-Sanchez S., Gala M., Žoldák G.: Nanoimpact in Plants : Lessons from the Transcriptome. Plants, 10, 751 (2021) Q1 IF2.762
  11. Skornova I., Simurda T., Stasko J., Horvath D., Zolkova J., Holly P., Brunclikova M., Samos M., Bolek T., Schnierer M., Slavik L., Kubisz P.: Use of fibrinogen determination methods in differential diagnosis of hypofibrinogenemia and dysfibrigenemia. Clinical Laboratory, 67:1028-1034 (2021) Q4 IF0.940
  12. Moskvin M., Huntosova V., Herynek V., Matous P., Michalcova A., Lobaz V., Zasonska B., Slouf M., Seliga R., Horak D.: In vitro cellular activity of maghemite/cerium oxide magnetic nanoparticles with antioxidant properties. Colloids and Surface B: Biointerfaces, 204:111824 (2021) Q1 IF4.389
  13. Sztachova T., Pechova I., Mikulova L., Stupak M., Jancura D., Fabian M.*: Peroxide stimulated transition between the ferryl intermediates of bovine cytochrome c oxidase. BBA-Bioenergetics, 1862:148447 (2021) Q1 IF3.465
  14. Džupponová V., Žoldák G.*: Salt-dependent passive adsorption of IgG1κ-type monoclonal antibodies on hydrophobic microparticles. Biophysical Chemistry, 275:106609 (2021) Q3 IF1.995
  15. Beňová E., Horenbecq V., Zeleňák V., Huntošová V., Almáši M., Máčajová M., Bergé-Lefranc D.: pH-responsive mesoporous silica drug delivery system, its biocompatibility and co-adsorption/co-release of 5-Fluorouracil and Naproxen. Applied Surface Science, 561:150011 (2021) Q1 IF6.182
  16. Agnolín F.L., Lu J.Ch., Kundrát M.*, Xu L.: Alvarezsaurid osteology: new data on cranial anatomy. Historical Biology, https://doi.org/10.1080/08912963.2021.1929203 (2021) Q2 IF2.023
  17. Horvath D.*, Tomkova S., Huntosova, V.*: Selection of Unique Molecules for Cancer Treatment by Distance-Based Method: Hypericin Effect on Respiratory Chain. Biophysica, 1:222-237 (2021) Q- IF-
  18. Monfroy Q.T., Kundrat M.*: The osteohistological variability in the evolution of basal avialans. Acta Zoologica, 00:1-28 (2021) Q2 IF1.258
  19. Nemergut M., Skrabana R., Berta M., Pluckthun A., Sedlak E.*: Purification of MBP fusion proteins using engineered DARPin affinity matrix. International Journal of Biological Macromolecules, 187:105-112 (2021) Q1 IF6.953
  20. Bano G., Kubackova J., Hovan A., Strejckova A., Ivanyi G.T., Vizsnyiczai G., Kelemen L., Zoldak G., Tomori Z., Horvath D.*: Power Spectral Density Analysis of Nanowire-Anchored Fluctuating Microbead Reveals a Double Lorentzian Distribution. mathematics, 9:1748 (2021) Q1 IF2.258
  21. Hovan A., Berta M., Sedlakova D., Miskovsky P., Bano G., Sedlak E.: Heme is responsible for enhanced singlet oxygendeactivation in cytochrome c. Physical Chemistry Chemical Physics, 23:15557-15563 (2021) Q1 IF3.676
  22. Kundrat M.*, Cruickshank R.I.: New information on multispherulitic dinosaur eggs: Faveoloolithidae and Dendroolithidae. Historical Biology, https://doi.org/10.1080/08912963.2021.1961764 (2021) Q1 IF2.023
  23. Monfroy Q.T., Kundrat M., Uesugi K., Hoshino M.: Dichotomy in formation and growth of bones of Yanornis martini (Pygostylia, Ornithuromorpha): study of thermal regime in an extinct bird. Historical Biology, https://doi.org/10.1080/08912963.2021.1960323 (2021) Q1 IF2.023
  24. Monfroy Q.T., Kundrat M., O’Connor J.K., Hai-Lu Y., Marone F., Stampanoni M., Smajda B.: Synchrotron microtomography-based osteohistology of Gansus yumenensis: new data on the evolution of uninterrupted bone deposition in basal birds. Acta Zoologica, 00, 1-27 (2021) (2021) Q2 IF1.258
  25. Sengupta A., Rognoni L.E., Merkel U., Zoldak G., Rief M.: SlyD Accelerates trans-to-cis Prolyl Isomerization in a Mechanosignaling Protein under Load. Journal of Physical Chemistry B, 125 (31): 8712-8721 (2021) Q1 IF2.991
  26. Gala M., Žoldák G.: Classifying Residues in Mechanically Stable and Unstable Substructures Based on a Protein Sequence: The Case Study of the DnaK Hsp70 Chaperone. nanomaterials, 11(9):2198 (2021) Q1 IF5.076
  27. Kundrát M.: Earliest migratory cephalic NC cells are potent to differentiate into dental ectomesenchyme of the two lungfish dentitions: tetrapodomorph ancestral condition of unconstrained capability of mesencephalic NC cells to form oral teeth. The Science of Nature, 108:37 (2021) Q2 IF1.954

2020 (21 publications)

  1. Kundrát M.*, Rich TH., Lindgren J., Sjövall P., Vickers-Rich P., Chiappe LM., Kear BP.: A polar dinosaur feather assemblage from Australia. Gondwana Research, 80:1-11 (2020) Q1 IF: 6.678
  2. Brutovský B., Horváth D.: In silico implementation of evolutionary paradigm in therapy design: Towards anti-cancer therapy as Darwinian process. Journal of Theoretical Biology 485: 110038 (2020) Q2 IF: 1.875
  3. Benova E., Berge-Lefranc D., Zelenak V., Almasi M., Huntošová V., Hornebecq V.: Adsorption properties, the pH-sensitive release of 5-fluorouracil and cytotoxicity studies of mesoporous silica drug delivery matrix. Applied Surface Science, 504: 144028 (2020) Q1 IF: 5.155
  4. Bugar G., Volostin M., Maksymyuk T., Zausinova J., Gazda V., Horvath D., Gazda J.: Techno-economic framework for dynamic operator selection in a multi-tier hetergeneous network. Ad Hoc Networks, 97:102007 (2020) Q1 IF: 3.490
  5. Maksymyuk T., Šlapak E., Bugár G., Horváth D., Gazda J.: Intelligent framework for radio access network design. Wireless Networks, 26:759-774 (2020) Q2 IF: 2.405
  6. Almasi M., Beňová E., Zelenak V., Madaj B., Huntošová V., Brus J., Urbanová M., Bednarcik J., Hornbecq V.: Cytotoxicity Study and Influence of SBA-15 Surface Polarity and pH on Adsorption and Release Properties of Anticancer Agent Pemetrexed. Materials Science and Engineering: C, 109: 110552 (2020) Q1 IF: 4.959
  7. Petrencakova M., Varhac R., Kozar T., Nemergut M., Jancura D., Schwer MS., Sedlak E.*: Conformational properties od LOV2 domain and its C450A variant within broad pH region. Biophysical Chemistry, 259: 106337 (2020) Q2 IF: 1.745
  8. Petrencakova M., Filandr F., Hovan A., Yassaghi G., Man P., Kozar T., Schwer MS., Jancura D., Pluckthun A., Novak P., Miskovsky P., Bano G., Sedlak E.*: Photoinduced damage of AsLOV2 domain is accompanied by increased singlet oxygen production due to flavin dissociation. SCIENTIFIC REPORTS, 10:4119 (2020) Q1 IF: 4.122
  9. Kopcova K., Mikulova L., Pechova I., Sztachova T., Cizmar E., Jancura D., Fabian M.*: Modulation of the electron-proton coupling at cytochrome a by the ligation of the oxidized catalytic center in bovine cytochrome c oxidase. BBA-Bioenergetics, 1861:148237 (2020) Q1 IF: 4.41
  10. Kundrat M.*, Xu X., Hancova M., Gajdos A., Guo Y., Chen D.: Evolutionary disparity in the endoneurocranial configuration between small and gigantic tyrannosauroids. Historical Biology, 32(5):620-634 (2020) Q2 IF: 2.023
  11. Lenkavska L., Tomkova S., Horvath D., Huntosova V.*: Searching for combination therapy by clustering methods: Stimulation of PKC in Golgi apparatus combined with hypericin induced PDT. Photodiagnosis and Photodynamic Therapy, 31:101813 (2020) Q2 IF: 2.589
  12. Horvath D.*, Zoldak G.: Entropy-based strategies for rapid pre-processing and classification of time series data from single-molecule force experiments. entropy, 22:701 (2020) Q2 IF: 2.494
  13. Kubackova J., Ivanyi GT., Kazikova V., Strejckova A., Hovan A., Zoldak G., Vizsnyiczai G., Kelemen L., Tomori Z., Bano G.: Bending dynamics of viscoelastic photopolymer nanowires. Applied Physics Letters, 117:013707 (2020) Q1 IF: 3.597
  14. Maksymyuk T., Gazda J., Vološin M., Bugar G., Horvath D., Klymash M., Dohler M.: Blockchain-empowered framework for decentralized network management in 6G. IEEE Communications Magazine, September 86-92 (2020) Q1 IF: 11.052
  15. Wang J., Hao X., Kundrát M.*, Liu Z., Uesugi K., Jurašeková Z., Guo B., Hoshino M., Li Y., Monfroy Q., Zhou B., Fabriciová G., Kang A., Wang M., Si Y., Gao J., Xu G., Li Z.: Bone tissue histology of the Early Cretaceous bird Yanornis: evidence for a diphyletic origin of modern avian growth strategies within Ornithuromorpha. Historical Biology, 32(10): 1421-1433 Q2 IF: 2.023
  16. Garajova K., Sedlakova D., Berta M., Gazova Z., Sedlak E.*: Destabilization effect of imidazolium cation-Hofmeister anion salts on cytochrome c. International Journal of Biological Macromolecules, 164: 3808-3813 (2020) Q1 IF: 5.16
  17. Dzupponova V., Huntosova V., Zoldak G.*: A kinetic coupling between protein unfolding and aggregation controls time-dependent solubility of the human myeloma antibody light chain. Protein Science, 29: 2408-2421 (2020) Q2 IF: 3.876
  18. Kundrat M.*, Coria R.A., Manning T.W., Snitting D., Chiappe L.M., Nudds J., Ahlberg P.E.: Specialized craniofacial anatomy of a titanosaurian embryo from Argentina. Current Biology, 30(21): 4263-4269.e2 Q1 IF: 9.601
  19. Wang X., Huang J., Kundrat M., Cau A., Liu X., Wang Y., Ju S.: A new jeholornithiform exhibits the earliest appearance of the fused sternum and pelvis in the evolution of avialan dinosaurus. Journal of Asian Earth Sciences, 199: 104401 (2020) Q1 IF: 2.762
  20. Sedlak E.*, Kozar T., Musatov A.: The Interplay among Subunit Composition, Cardiolipin Content, and Aggregation State of Bovine Heart Cytochrome c Oxidase. cells, 9:2588 (2020) Q2 IF: 4.829
  21. Siebert H., Kozar T., Petridis A.K.: Obituary for Roland Schauer. Glycoconjugate Journal, 37:409-411 (2020)

Book Chapter:

  1. Rich T. H., Trusler P., Kool L., Pickering D., Alistair E., Siu K., Maksimenko A., Kundrát M., Gostling N. J., Morton S., Vickers-Rich P.: A third, remarkably small, tribosphenic mammal from the Mesozoic of Australia. In Biological Consequences of Plate Tectonics: New Perspectives on Post-Gondwana Break-up – A tribute to Ashok Sahni, Vertebrate Paleobiology and Paleoanthropology Series (eds. G. V. R. Prasad and R. Patnaik), 67-75, Springer Nature Switzerland, (2020).

2019 (17 publications)

  1. Kvasilova A., Gregorovicova M., Kundrat M., Sedmera D.: HNK‐1 in Morphological Study of Development of the Cardiac Conduction System in Selected Groups of Sauropsida. The Anatomical Record 302:69-82 (2019) Q1 IF1.373
  2. Kundrat M., Nudds J., Kear B.P., Lu J., Ahlberg P.: The first specimen of Archaeopteryx form Upper Jurassic Mornsheim Formation of Germany. Historical Biology 31:3-63 (2019) Q2 IF1.249
  3. Zhang R., Zhang N., Mohri M., Wu L., Eckert T., Krylov V.B., Antosova A., Ponikova S., Bednarikova Z., Markart P., Gunther A., Norden B., Billeter M., Schauer R., Scheidig A.J., Ratha B.N., Bhunia A., Hesse K., Enani M.A., Steunmeyer J., Petridis A.K., Kozar T., Gazova Z., Nifantiev N.E., Siebert H.Ch.: Nanomedical relevance of the intermolecular interaction dynamics-examples from lysozymes and insulins. ACS Omega 4:4206-4220 (2019) Q1 IF ?
  4. Lenkavska L., Blascakova L., Jurasekova Z., Macajova M., Bilcik B., Cavarga I., Miskovsky P., Huntosova V.: Benefits of hypericin transport and delivery by low- and high-density lipoproteins to cancer cells: From in vitro to ex ovo. Photodiagnosis and Photodynamic Therapy 25:214-224 (2019) Q2 IF2.895
  5. Siposova K., Kozar T., Huntosova V., Tomkova S., Musatov A.: Inhibition of amyloid fibril formation and disassembly of pre-formed fibrils by natural polyphenol rottlerin. BBA-Proteins and Proteomics 1867:259-274 (2019) Q1 IF2.609
  6. Shen C., Lu J., Gao Ch., Hoshino M., Uesugi K., Kundrat M.: Forearm bone histology of the small theropod Daliansaurus liaoningensis (Paraves: Troodontidae) from the Yixian Formation, Liaoning, China. Historical Biology 31:253-261 (2019) Q2 IF1.249
  7. Siposova K., Sedlak E., Kozar E., Nemergut M., Musatov A.: Dual effect of non-ionic detergent Triton X-100 on insulin amyloid formation. Colloids and Surfaces B: Biointerfaces 173:709-718 (2019) Q1 IF3.997
  8. Schwartz D., Kundrat M., Tischlinger H., Dyke G., Carney R.M.: Ultraviolet light illuminates the avian nature of the Berlin Archaeopteryx Scientific Reports 9:6518 (2019) Q1 IF4.122
  9. Jutkova A.M., Chorvat D., Miskovsky P., Jancura D., Datta S.: Encapsulation of anticancer drug curcumin and co-loading with photosensitizer hypericin into lipoproteins investigated by fluorescence resonance energy transfer. International Journal of Pharmaceutics 564:369-378 (2019) Q1862
  10. Siposova K., Huntosova V., Shlapa Y., Lenkavska L., Macajova M., Belous A., Musatov A.: Advances in the study of cerium oxide nanoparticles: new insights into antiamyloidogenic activity. ACS Applied Bio Materials 2:1884-1806 (2109) Q- IF-
  11. Stroffekova K., Tomkova S., Huntosova V., Kozar T.: Importance of Hypericin-Bcl2 interactions for biological effects at subcellular levels. Photodiagnosis and Photodynamic Therapy 28:38-52 (2019) Q2 IF2.895
  12. Sedlak E., Sedlakova D., Marek J., Hancar J., Garajova K., Zoldak G.: Ion-specific protein/water interface determines the Hofmeister effect on the kinetic stability of glucose oxidase. Journal of Physical Chemistry B 123:7965-7973 (2019) Q1 IF2.923
  13. Meinhold S., Bauer D., Huber J., Merkel U., Weißl A., Žoldák G., Rief M.: An Active, Ligand-Responsive Pulling Geometry Reports on Internal Signaling between Subdomains of the DnaK Nucleotide-Binding Domain in Single-Molecule Mechanical Experiments. Biochemistry 58(47): 4744-4750 (2019) Q1 IF: 2.952
  14. Schwarz D., Kundrát M., Tischlinger H., Dyke G., Carney RM.: Ultraviolet light illustrates the presence of a notarium-like structure in the Berlin Archaeopteryx skeleton. Scientific Reports 9: 6518 (2019) Q1 IF: 4.525
  15. Torreggiani A., Tinti A., Jurašeková Z., Capdevila M., Saracino M., Di Foggia M.: Structural Lesions of Proteins Connected to Lipid Membrane Damages Caused by Radical Stress: Assessment by Biomimetic Systems and Raman Spectroscopy. Biomolecules 9(12): 794 (2019) Q1 IF: 4.694
  16. Horvath D., Gazda J., Slapak E., Maksymyuk.: Modeling and analysis of self-organizing UAV-assisted mobile networks with dynamic in-demand deployment. Entropy 21:1077 (2019) Q2 IF: 2.419
  17. Jurasekova Z., Garcia-Leis A., Sanchez-Cortes S., Tinti A., Torreggiani A.: Structural analysis of the neuropeptide substance P by using vibrational spectroscopy. Analytical and Bioanalytical Chemistry 411:7419-7430 (2019)

Book Chapter:

  1. Tych K., Zoldak G.: Stable substructures in proteins and how to find them using single-molecule force spectroscopy. In: Kister A. (eds) Protein Supersecondary Structures. Methods in Molecular Biology, vol 1958. Humana Press, New York, NY, 263-282 (2019)

Conference contribution:

  1. Kubacková J., Kaziková V., Žoldák G., Tomori Z., Bánó G.: Mechanical perturbation of tailor-made elastic micro-structures using optical tweezers. Proceedings of SPIE – The International Society for Optical Engineering 11083, art. no. 1108334 (2019)
  2. Huntošova V., Seliga R., Horváth D.: Time-resolved measurements of tissue oxygenation and oxidative stress level in cancer cells. In Genetic toxicology and cancer prevention : Bilateral  Czech  and  Slovak  Workshop – Bratislava  :  Cancer  Research Institute, Biomedical Research Center of the Slovak Academy of Sciences, (2019), p. 62-67. ISBN 978-80-972247-4-5

2018 (20 publications)

  1. Zanolli C.,Pan L., Dumoncel J., Kullmer O., Kundrat M., Liu W., Macchiarelli R., Mancini L., Schrenk F., Tuniz C.: Inner tooth morphology of Homo erectus from Zhoukoudian. New evidence from an old collection housed at Uppsala University, Sweden Journal of Human Evolution, 116:1-13 (2018) Q1 IF3.992
  2. Sedlak E., Zoldak G., Wittung-Stafshede P.: Synergistic effects of copper sites on apparent stability of multicopper oxidase, Fet3p. International Journal of Molecular Sciences, 19:269 (2018) Q1 IF3.687
  3. Kesa P., Jancura D., Kudlacova J., Valusova E., Antalik M. : Excitation of triplet states of hypericin in water mediated by hydrotropic cromolyn sodium salt. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 193:158-191 (2018) Q2 IF2.880
  4. Tomkova S., Misuth M., Lenkavska L., Miskovsky P., Huntosova V.: In vitro identification of mitochondrial oxidative stress production by time-resolved fluorescence imaging of glioma cells. BBA-Molecular Cell Reasearch, 1865:616-628 (2018) Q1 IF4.521
  5. Horvath D., Brutovsky B.: Toward understanding of the role of reversibility of phenotypic switching in the evolution of resistance to therapy. Physics Letters A, 382:1586-1600 (2018) Q2 IF1.772
  6. Bauer D., Meinhold S., Jakob R.P., Stigler J., Merkel U., Maier T., Rief M., Zoldak G.: A folding nucleus and minimal ATP binding domain of Hsp70 identified by single-molecule force spectroscopy. PNAS, 115:4666-4671 (2018) Q1 IF9.661
  7. Schaefer J.V., Sedlak E., Kast F., Nemergut M., Pluckthun A.: Modification of the kinetic stability of immunoglobulin G by solvent additives. MABS, 10:607-623 (2018) Q1 IF5.165
  8. Hovan A., Datta S., Kruglik S.G., Jancura D., Miskovsky P., Bano G.: Phosphorescence kinetics of singlet oxygen produced by photosensitization in spherical nanoparticles. Part I. Theory. The Journal of PHYSICAL CHEMISTRY B, 122:5147-5153 (2018) Q1 IF3.117
  9. Datta S., Hovan A., Jutkova A., Kruglik S.G., Jancura D., Miskovsky P., Bano G.: Phosphorescence kinetircs of singlet oxygen produced by photosensitization in spherical nanoparticles. Part II. The case of hypericin-loaded low-density lipoprotein particles. The Journal of PHYSICAL CHEMISTRY B, 122:5154-5160 (2018) Q1 IF3.117
  10. Datta S., Jutkova A., Sramkova P., Lenkavska L., Huntosova V., Chorvat D., Miskovsky P., Jancura D., Kronek J.: Unravelling the excellent chemical stability and bioavailability of solvent responsive curcumin-loases 2-ethyl-2oxazoline-grad-2-(4-dodecyloxyphenyl)-2-oxazoline copolymer nanoparticles for drug delivery. Biomacromolecules, 19:2459-2471 (2018) Q1 IF5.738
  11. Joniova J., Kazikova V., Gerelli E., Bano G., Wagnieres G.: Measurements of the optical coefficients of the protoporphyrin IX endogenously producing yeast-based model in the visible and NIR. Journal of Biomedical Optics, 23:075001 (2018) Q1 IF2.367
  12. Blascakova L., Horvath D., Belej D., Wagnieres G., Miskovsky P., Jancura D., Huntosova V.: Hypericin can cross barriers in the chicken’s chorioallantoic membrane model when delivered in low-density lipoproteins. Photodiagnosis and Photodynamic Therapy, 23:306-313 (2018) Q2 IF2.895
  13. Gazda J., Slapak E., Bugar G., Horvath D., Maksymyuk T., Jo M.: Unsupervised learning algorithm for intelligent coverage planning and performance optimization of multitier heterogeneous network. IEEE Access, 6:39807-39819 (2018) Q1 IF3.557
  14. Horvath D., Brutovsky B.: A new conceptual framework for the therapy by optimized multidimensional pulses of therapeutic activity. The case of multiple myeloma model. Journal of Theoretical Biology, 454:292-309 (2018) Q2 IF1.833
  15. Kundrat M., Xu X., Hancova M., Gajdos A., Guo Y., Chen D.: Evolutionary disparity in the endoneurocranial configuration between small and gigantic tyrannosauroids. Historical Biology An International Journal of Paleobiology, DOI: 10.1080/08912963.2018.1518442 (2018) Q2 IF1.249
  16. Tomaskova N., Varhac R., Lysakova V., Musatov A., Sedlak E.: Peroxidase activity of cytochrome c in its compact state depends on dynamics of the heme region. BBA-Proteins and Proteomics, 1866:1073-1083 (2018) Q1 IF2.609
  17. Varricchio D.J., Kundrat M., Hogan J.: An intermediate incubation period and primitive brooding in a theropod dinosaur. SCIENTIFIC REPORTS, 8:12454 (2018) Q1 IF 4.122
  18. Dusekova E., Garajova K., Yavaser R., Varhac R., Sedlak E.: Hofmeister effect on catalytic properties of chymotrypsin is substratedependent. Biophysical Chemistry, 243:8-16 (2018) Q2 IF1.870
  19. Kopcova K., Blascakova L., Kozar T., Jancura D., Fabian M.: Response of Heme Symmetry to the Redox State of Bovine Cytochrome c Oxidase. Biochemistry, 57: 4105-4113 (2018) Q1 IF2.997
  20. Orsagova Kralova Z., Orinak A., Orinakova R., Petrus O., Macko J., Radonak J., Sukovska Lakyova L., Jurasekova Z., Smith R.M., Streckova M., Koval K.: Electrochemically deposited silver detection substrate for surface-enhanced Raman spectroscopy cancer diagnostics. Journal of Biomedical Optics, 23:075002 (2018) Q1 IF2.367

Proceedings:
Ulicny J., Kozar T.: Roadmap for computer-aided modeling of theranostics and related nanosystems. EPJ Web of Conferences, 173:05017 (2018)
Espina Garcia A., Miskovsky P., Jurasekova Z.: Štúdium stability a rozkladu železogalových atramentov pomocou Ramanovej a SERS spektroskopie Study of stability and deterioretion of Iron-Gall inks by means of Raman and SERS spectroscopy. In Zborník príspevkov z konferencie CSTI 2018, ISBN 978-80-8060-435-6, STU Bratislava, 85-102 (2018)

Book chapters:
Huntosova V., Wagnieres G.: CHAPTER 15: PO2 measurements in biological tissues by luminescence lifetime spectroscopy: strategies to exploit or minimize phototoxic effects in tumors. In book Quenched-phosphorescence detection of molecular oxygen: applications in life sciences. RSC Detection Science, 298-318 (2018)
Jancura D., Zahradnik I.: Slovenská biofyzikálna spoločnosť v kocke. Československý časopis pro fyziku 4:246-248 (2018)

2017 (21 publications)

  1. Garajova K., Balogova A., Dusekova E., Sedlakova D., Sedlakova D., Sedlak E., Varhac R.: Correlation of lysozyme activity and stability in the presence of Hofmeister series anions. Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, 1865:281–288 (2017)
  2. Huntosova V., Novotova M., Nichtova Z., Balogova L., Maslanakova M., Petrovajova D., Stroffekova K.: Assessing light-independent effects of hypericin on cell viability, ultrastructure and metabolism in human glioma and endothelial cells. Toxicology in Vitro, 40:184–195 (2017)
  3. Joniova J., Rebic M., Strejckova A., Huntosova V., Stanicova J., Jancura D., Miskovsky P., Bano G.: Formation of large hypericin aggregates in giant unilamellar vesicles-experiments and modeling . Biophysical Journal, 112:966–975 (2017)
  4. Shen C.Z., Zhao B., Gao Ch.L., Lu J.C., Kundrat M.: A new troodontid dinosaur (Liaoningvenator curriei gen. et sp. nov.) from he early cretaceous yixian formation of western liaoning province, China. Acta Geoscientica Sinica, 38:1–13 (2017)
  5. Kear B.P., Larsson D., Lindgren J., Kundrat M.: Exceptionally prolonged tooth formation in elasmosaurid plesiosaurians . PLOS ONE, DOI:10.1371 (2017)
  6. Gerelli E., Huntosova V., Horvath D., Wagnieres G.: In vivo measurement of the tissue oxygenation by time-resolved luminescence spectroscopy of protoporphyrin IX: strategies to minimize artefacts associated with photoproducts . Proc. SPIE 10060, Optical Biopsy XV: Toward Real-Time Spectroscopic Imaging and Diagnosis, 1006016 (2017)
  7. Horvath D., Gazda J., Brutovsky B.: A new bio-inspired, population-level approach to the socioeconomic evolution of dynamic spectrum access services . International Journal of Modern Physics C, 28:1750062–1–1750062–21 (2017)
  8. Misuth M., Joniova J., Belej D., Hrivnak S., Horvath D., Huntosova V.: Estimation of PKCδ autophosphorylation in U87 MG glioma cells: combination of experimental, conceptual and numerical appriaches . Journal of Biophotonics, 10:423–432 (2017)
  9. Misuth M., Joniova J., Horvath D., Dzurova L., Nichtova Z., Novotova M., Miskovsky P., Stroffekova K., Huntosova V.: The flashlights on a distinct role of protein kinase C δ: Phosphorylation of regulatory and catalytic domain upon oxidative stress in glioma cells . Cellular Signalling, 34:11–22 (2017)
  10. Misuth M., Horvath D., Miskovsky P., Huntosova V.: Synergism between PKCδ regulators hypericin and rottlerin enhances apoptosis in U87 MG glioma cells after light stimulation . Photodiagnosis and Photodynamic Therapy, 18:267–274 (2017)
  11. Pu H., Zelenitsky D.K., Lu J., Currie P.J., Carpenter K., Xu L., Koppelhus E.B., Jia S., Xiao L., Chuang H., Li T., Kundrat M., Shen C.: Perinate and eggs of a giant caenagnathid dinosaur from the late cretaceous of central China . Nature communications, 14952 (2017)
  12. Zoldak G., Jancura D., Sedlak E.: The fluorescence intensities ratio is not a reliable parameter for evaluation of protein unfolding transitions . Protein Science, 26:1236–1239 (2017)
  13. Huntosova V., Gerelli E., Horvath D., Wagnieres G.: Measurement of pO2 by luminescence lifetime spectroscopy: A comparative study of the phototoxicity and sensitivity of [Ru(Phen)3]2+ and PdTCPP in vivo . Journal of Biophotonics, 10:708–717 (2017)
  14. Belej D., Jurasekova Z., Nemergut M., Wagnieres G., Jancura D., Huntosova V.: Negligible interaction of [Ru(Phen)3]2+ with human serum albumin makes it promising for a reliable invivo assessment of the tissue oxygenation . Journal of Inorganic Biochemistry, 174:37–44 (2017)
  15. Shen C., Lu J., Liu S., Kundrat M., Brusatte S.L., Gao H.: A new troodontid dinosaur from the lower cretaceous yixian formation of liaoning province, China. Acta Geologica Sinica, 91:763–780 (2017)
  16. Gazda J., Bugar G., Volosin M., Drotar P., Horvath D., Gazda V.: Dynamic spectrum leasing and retail pricing using an experimental economy . Computer Networks, 121:173–184 (2017)
  17. Lu J., Li G., Kundrat M., Lee YN., Sun Z., Kobayashi Y., Shen C., Teng F., Liu H.: High diversity of the Ganzhou Oviraptorid Fauna increased by a new „cassowary-like“ crested species . Scientific REPORTS, 7(1): 6393 (2017)
  18. Sedlak E., Musatov A.: Inner mechanism of protection of mitochondrial electron-transfer proteins against oxidative damage. Focus on hydrogen peroxide decomposition . Biochimie, 142:152–157 (2017)
  19. Musatov A., Sedlak E.: Role of cardiolipin in stability of integral membrane proteins . Biochimie, 142:102–111 (2017)
  20. Nemergut M., Zoldak G., Schaefer J.V., Kast F., Miskovsky P., Plückthun A., Sedlak E.: Analysis of IgG kinetic stability by differential scanning calorimetry, probe fluorescence and light scattering . Protein Science, 26(11): 2229–2239 (2017)
  21. Garajova K., Zimmermann M., Petrencakova M., Dzurova L., Nemergut M., Skultety L., Zoldak G., Sedlak E.: The molten-globule residual structure is critical for reflavination of glucose oxidase . Biophysical Chemistry, 230: 74–83 (2017)

2016 (16 publications)

  1. Musatov A., Varhac R., Hosler JP. , Sedlak E.: Delipidation of cytochrome c oxidase from Rhodobacter sphaeroides destabilizes its quaternary structure. Biochimie, 125:23–31 (2016)
  2. Schütz M., Schoppe J., Sedlak E., Hillenbrand M., Nagy-Davidescu G., Ehrenmann J., Klenk C., Egloff P., Kummer L., Plückthun A.: Directed evolution of G proteincoupled receptors in yeast for higher functional production in eukaryotic expression hosts. Scientific REPORTS. 6: 21508 (2016)
  3. Horvath D., Brutovsky B.: Study of selected phenotype switching strategies in time varying environment. Physics Letters A. 380:1267–1278 (2016)
  4. Horvath D., Ulicny J., Brutovsky B.: Self-organised manifold learning and heuristic charting via adaptive metrics. Connection Science. 1360–0494 (2016)
  5. Lopez-Tobar E., Verebova V., Blascakova L., Jancura D., Fabriciova G., Sanchez-Cortes S.: Detection and aggregation of the antitumoral drug parietin in ethanol/water mixture and on plasmonic metal nanoparticles studied by surface-enhanced optical spectroscopy: Effect of pH and ethanol concentration. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. 159:134–140 (2016)
  6. Misuth M., Joniova J., Belej D., Hrivnak S., Horvath D., Huntosova V.: Estimation of PKCdelta autophosphorylation in U87 MG cells: combination of experimental, conceptual and numerical approaches. Journal of Biophotonics 10 May online (2016)
  7. Maslanakova M., Balogova L., Miskovsky P., Tkacova R., Stroffekova K.: ” Anti- and Pro-apoptotic Bcl2 proteins distribution and metabolic profile in human coronary aorta endothelial cells before and after HypPDT.”:[http://link.springer.com/…3-016-0740-y] Cell Biochemistry and Biophysics 74(3):435–447 (2016)
  8. Verebova V., Belej D., Joniova J., Jurasekova Z., Miskovsky P., Kozar T., Horvath D., Stanicova J., Huntosova V.: Deeper insights into the drug defense of glioma cells against hydrophobic molecules. International Journal od Pharmaceutics 503:56–67 (2016)
  9. Huntosova V., Gerelli E., Horvath D., Wagnieres G.: Measurement if pO2 by luminescence lifetime spectroscopy: A comparative study of the phototoxicity and sensitivity of [Ru(Phen)3]2+ and PdTCPP in vivo. Journal of Biophotonics 2 September (2016)
  10. Varchola J., Zelonkova K., Chorvat Jr.D., Jancura D., Miskovsky P., Bano G.: Singlet oxygen produced by quasi-continuous photo-excitation of hypericin in dimethyl-sulfoxide. Journal of Luminescence. 177:17–21 (2016)
  11. Lu J., Kundrat M., Shen C.: New meterial of the Pterosaur Gladocephaloideus Lu et al., 2012 from the early Cretaceous of Liaoning Province, China, with comments on its systematic position. PLoS ONE 11(6): e0154888 (2016)
  12. Horvath D., Brutovsky B.: Etiology of phenotype switching strategy in time varying stochastic environment. Physica A. 462:455–468 (2016)
  13. Burikova M., Bilcik B., Macajova M., Vyboh P., Bizik J., Mateasik A., Miskovsky P., Cavarga I.: Hypericin fluorescence kinetics in the presence of low density lipoproteins: study on quail CAM assay for topical delivery. General Physiology Biophysics 35:459–468 (2016)
  14. Garcia-Leis A., Jancura D., Antalik M., Garcia-Ramos J.V., Sanchez-Cortes S., Jurasekova Z.: Catalytic effects of silver plasmonic nanoparticles on the redox reaction leading to ABTS.+ formation studied using UV-visible and Raman spectroscopy. Physical Chemistry Chemical Physics. 18:26562–26571(2016)
  15. Huntosova V., Gerelli E., Zellweger M., Wagnieres G.: Effect of PpIX photoproducts formation on pO2 measurement by time-resolved delayed fluorescence spectroscopy of PpIX in solution and in vivo. Journal of Photochemistry and Photobiology B: Biology. 164:49–56 (2016)
  16. Poropat S.F., Mannion P.D., Upchurch P., Hocknull S.A., Kear B.P, Kundrat M., Tischler T.R., Sloan T., Sinapius G.H.K. , Elliott J.A., Elliott D.A.: New Australian sauropods shed light on Cretaceous dinosaur palaeobiogeography. Scientific REPORTS. 6: 34467 (2016)

2015 (11 publications)

  1. Rebic M., Mocci F., Laaksonen A., Ulicny J.: Multiscale simulations of human telomeric G-quadruplex DNA. Journal of Physical Chemistry B. 119:105–113 (2015)
  2. Kubackova J., Fabriciova G., Miskovsky P., Jancura D., Sanchez-Cortes S.: Sensitive surface-enhanced Raman spectroscopy (SERS) detection of organochlorine pesticides by alkyl dithiol-functionalized metal nanoparticles-induced plasmonic hot spots. Analytical Chemistry 87:663–669 (2015)
  3. Horilova J., Studier H., Nadova Z., Miskovsky P., Chorvat D. Jr., Marcek Chorvatova A.: Time-resolved spectrometry of mitochondrial NAD(P)H fluorescence and its applications for evaluating the oxidative state in living cells. Mitochondrial Medicine/Methods in Molecular Biology 1264:183–193 (2015)
  4. Sedlák E., Schaefer J.V., Marek J., Gimeson P., Plückthun A.: Advanced Analyses of Kinetic Stabilities of IgGs modified by Mutations and Glycosylation. Protein Science 24: 1100–1113 (2015)
  5. Sedlak E., Robinson N.C.: Destabilization of the quaternary structure of bovine heart cytochrome c oxidase upon removal of tightly bound cardiolipin. Biochemistry 54:5569–5577 (2015)
  6. Varhac R., Sedlakova D., Stupak M., Sedlak E.: Non-two-state thermal denaturation of ferricytochrome c at neutral and slightly acidic pH values. Biophysical Chemistry 2003–204:41–50 (2015)
  7. Ponikova S., Antosova A., Demjen E., Sedlakova D., Marek J., Varhac R., Gazova Z., Sedlak E.: Lysozyme stability and amyloid fibrillization dependence on Hofmeister anions in acidic pH. Journal of Biological Inorganic Chemistry 20:921–933 (2015)
  8. Vizsnyiczai G., Lestyan T., Joniova J., Aekbote L., Strejckova A., Ormos P., Miskovsky P., Kelemen L., Bano G.: Optically trapped surface-enhanced Raman probes prepared by silver photoreduction to 3D microstructures. Langmuir 31:10087–10093 (2015)
  9. Cernak J., Helgesen G., Cizmar E., Kovac J., Jurasekova Z., Voltr J.: Magnetic properties of graphene nanodisk and nanocone powders at low temperatures. Physical Review B 92:155429 (2015)
  10. Brutovsky B., Horvath D.: Towards inverse modeling of intratumor heterogeneity. Open Physics 13:232–241 (2015)
  11. Misuth M., Joniova J., Ferencakova M., Miskovsky P., Nadova Z.: Effect of Hyp delivery system on PKCα activity: What will happen after pkcα gene silencing and Hyp photo-activation? Proceeding SPIE9550, Biosensing and Nanomedicine VIII 95500J (2015)

2014 (13 publications)

  1. Sedlák E., Varhač R., Musatov A., Robinson N.C.: The Kinetic Stability of Cytochrome c Oxidase: Effect of Bound Phospholipid and Dimerization. Biophysical Journal 107:2941–2949 (2014)
  2. Huntosova V., Stroffekova K., Wagnieres G., Novotova M., Nichtova Z., Miskovsky P.: Endosomes: guardians against [Ru(Phen)3](2+) photo-action in endothelial cells during in vivo pO2 detection? Metallomics 6: 2279–2289 (2014)
  3. Horvath D., Malikova Z., Luckanicova M.: The policy-dependent statistics and induced heterogeneity of the supported agents on the inter and intra company levels. International Journal of Modern Physics C. 26: DOI: 10.1142/S0129183115500485 (2014)
  4. Varchola J., Huntosova V., Jancura D., Wagnieres G., Miskovsky P., Bano G.: Temperature and oxygen-concentration dependence of singlet oxygen production by RuPhen as induced by quasi-continuous excitation. Photochemical and Photobiological Sciences. 13:1781–1787 (2014)
  5. Joniova J., Misuth M., Sureau F., Miskovsky P., Nadova Z.: Effect of PKCα expression on Bcl-2 phosphorylation and cell death by hypericin. Apoptosis 19: 1779–1792 (2014)
  6. Joniova J., Buriankova L., Buzova D., Miskovsky P., Jancura D.: Kinetics of incorporation/redistribution of photosensitizer hypericin to/from high-density lipoproteins. International Journal of Pharmaceutics. 475: 578–584 (2014)
  7. Huntosova V., Gay S., Nowak-Sliwinska P., Rajendran S.K., Zellweger M., van den Bergh H., Wagnieres G.: In vivo measurement of tissue oxygenation by time-resolved luminescence spectroscopy: advantageous properties of dichlorotris(1,10-phenanthroline)-ruthenium(II) hydrate. Journal of Biomedical Optics. 19:077004 (2014)
  8. Jancura D., Stanicova J., Palmer G., Fabian M.: How hydrogen peroxide is metabolized by oxidized cytochrome c oxidase. Biochemistry. 53:3564–3575 (2014)
  9. Dzurova L., Petrovajova D., Nadova Z., Huntosova V., Miskovsky P., Stroffekova K.: The role of anti-apoptotic protein kinase Cα in response to hypericin photodynamic therapy in U-87 MG cells. Photodiagnosis and Photodynamic Therapy. 11: 213–226 (2014)
  10. Kubackova J., Izquierdo-Lorenzo I., Jancura D., Miskovsky P., Sanchez-Cortes S.: Adsorption of linear aliphatic α,ω-dithiols on plasmonic metal nanoparticles: a structural study based on surface-enhanced Raman spectra. Physical Chemistry Chemical Physics. 16:11461–11470 (2014)
  11. Omar M.A., Miskovsky P., Bano G.: Proof-of-principle for simple microshelter-assisted buffer exchange in laser tweezers: interaction of hypericin with single cells. Lab on a Chip. 14:1579–1584 (2014)
  12. Cavarga I., Bilcik B., Vyboh P., Zaskvarova M., Chorvat D. Jr., Kasak P., Mlkvy P., Mateasik A., Chorvatova A., Miskovsky P.: Photodynamic effect of hypericin after topical application in the ex ovo quail chorioallantoic membrane model. Planta Medica. 80(01): 56–62 (2014)
  13. Verebova V., Adamcik J., Danko D., Podhradsky D. Miskovsky P., Stanicova J.: Anthraquinones quinizarin and danthron unwind negatively supercoiled DNA and lengthen linear DNA. Biochemical and Biophysical Research Communications. 44:50–55 (2014)